SeqAn3 3.4.0-rc.1
The Modern C++ library for sequence analysis.
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A state that is only used for global alignments. More...
#include <seqan3/alignment/pairwise/policy/simd_find_optimum_policy.hpp>
A state that is only used for global alignments.
simd_t | The simd vector score type; must model seqan3::simd::simd_concept. |
This state is only used for the global alignment to compute the correct optimum for every sequence pair. If the sequences have different lengths the respective cells in the alignment matrix need to be queried to check for the global optimum. In addition, the final scores and coordinates must be corrected as they are based on the outer matrix defined by the longest sequence in the first and second collection.