alphabet_base() noexcept=default | seqan3::alphabet_base< derived_type, size, char_t > | |
alphabet_base(alphabet_base const &) noexcept=default | seqan3::alphabet_base< derived_type, size, char_t > | |
alphabet_base(alphabet_base &&) noexcept=default | seqan3::alphabet_base< derived_type, size, char_t > | |
alphabet_size | seqan3::alphabet_base< derived_type, size, char_t > | static |
alphabet_tuple_base() noexcept | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | inlineprivate |
alphabet_tuple_base(alphabet_tuple_base const &)=default | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | private |
alphabet_tuple_base(alphabet_tuple_base &&)=default | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | private |
alphabet_tuple_base(component_types... components) noexcept | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | inline |
alphabet_tuple_base(component_type const alph) noexcept | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | inlineexplicit |
alphabet_tuple_base(indirect_component_type const alph) noexcept | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | inlineexplicit |
assign_char(char_type const c) noexcept | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | inline |
alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t >::assign_char(char_type const chr) noexcept | seqan3::alphabet_base< derived_type, size, char_t > | inline |
assign_component_rank(ptrdiff_t const r) noexcept | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | inlineprivate |
assign_phred(phred_type const c) noexcept | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | inline |
assign_rank(rank_type const c) noexcept | seqan3::alphabet_base< derived_type, size, char_t > | inline |
base_t typedef | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | private |
base_type typedef | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | private |
char_is_valid(char_type const c) noexcept | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | inlinestatic |
char_type typedef | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | |
complement() const noexcept | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | inline |
component_list typedef | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | private |
cummulative_alph_sizes | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | privatestatic |
derived_type | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | private |
is_component | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | privatestatic |
is_unique_component | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | privatestatic |
load_minimal(archive_t const &, wrapped_alphabet_t &&l, alphabet_rank_t< detail::strip_cereal_wrapper_t< wrapped_alphabet_t > > const &r) | semialphabet | related |
operator type() const noexcept | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | inline |
operator=(qualified const &) noexcept=default | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | |
operator=(qualified &&) noexcept=default | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | |
operator=(component_type const alph) noexcept | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | inline |
operator=(indirect_component_type const alph) noexcept | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | inline |
seqan3::alphabet_base::operator=(alphabet_base const &) noexcept=default | seqan3::alphabet_base< derived_type, size, char_t > | |
seqan3::alphabet_base::operator=(alphabet_base &&) noexcept=default | seqan3::alphabet_base< derived_type, size, char_t > | |
phred_type typedef | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | |
qualified() noexcept=default | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | |
qualified(qualified const &) noexcept=default | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | |
qualified(qualified &&) noexcept=default | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | |
qualified(component_type const alph) noexcept | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | inline |
qualified(indirect_component_type const alph) noexcept | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | inline |
qualified(sequence_alphabet_type &&, quality_alphabet_type &&) -> qualified< std::decay_t< sequence_alphabet_type >, std::decay_t< quality_alphabet_type > > | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | related |
quality_alphabet_type typedef | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | |
rank | seqan3::alphabet_base< derived_type, size, char_t > | private |
rank_sum_helper(component_types... components, std::index_sequence< idx... > const &) noexcept | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | inlineprivatestatic |
rank_to_char(typename base_type::rank_type const rank) | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | inlineprivatestatic |
rank_to_char_table | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | privatestatic |
rank_to_phred | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | privatestatic |
rank_type typedef | seqan3::alphabet_base< derived_type, size, char_t > | protected |
save_minimal(archive_t const &, alphabet_t const &l) | semialphabet | related |
seqan3_alphabet_tuple_like | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | privatestatic |
seqan3_recursive_required_types typedef | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | private |
seqan3_required_types typedef | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | private |
sequence_alphabet_type typedef | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | |
to_char() const noexcept | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | inline |
to_component_rank() const noexcept | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | inlineprivate |
to_phred() const noexcept | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | inline |
to_rank() const noexcept | seqan3::alphabet_base< derived_type, size, char_t > | inline |
~alphabet_base() noexcept=default | seqan3::alphabet_base< derived_type, size, char_t > | |
~alphabet_tuple_base()=default | seqan3::alphabet_tuple_base< qualified< sequence_alphabet_t, quality_alphabet_t >, sequence_alphabet_t, quality_alphabet_t > | private |
~qualified() noexcept=default | seqan3::qualified< sequence_alphabet_t, quality_alphabet_t > | |